All, but the prologue and gaiden chapters are the same as Fire Emblem: Shadow Dragon and the Blade of Light.
A list of chapters from Fire Emblem: Shadow Dragon.
- Prologue: Prologue I, II, III, and IV
- Chapter 1: Marth Embarks
- Chapter 2: The Pirates of Galder
- Chapter 3: A Brush in the Teeth
- Chapter 4: Battle in the Lea
- Chapter 5: Champions of Aurelis
- Chapter 6: Fire Emblem
- Chapter 6x: In War's Grip
- Chapter 7: Lefcandith Gauntlet
- Chapter 8: Port Warren
- Chapter 9: The Pyrathi Dragon
- Chapter 10: Princess Minerva
- Chapter 11: Knorda Market
- Chapter 12: The Ageless Palace
- Chapter 12x: A Traitor's Worth
- Chapter 13: The Wooden Cavalry
- Chapter 14: Land of Sorrow
- Chapter 15: An Oasis of Magic
- Chapter 16: The Battle for Altea
- Chapter 17: Star and Savior
- Chapter 17x: Helena Castle
- Chapter 18: The Sable Order
- Chapter 19: Manakete Princess
- Chapter 20: Camus the Sable
- Chapter 20x: The Lair of Fire
- Chapter 21: Clash in Macedon
- Chapter 22: A Knight-Filled Sky
- Chapter 23: Dark Pontifex
- Chapter 24: The Dragonkin Realm
- Chapter 24x: The Alterspire
- Endgame: Chosen by Fate
- Epilogue